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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6010472 chr22:49157038 A/T NAGA chr22:42454358-42466846:- 0.67 7.36 7.96E-13 Box Plot
THCA rs6010472 chr22:49157038 A/T NCAPH2 chr22:50946645-50961901:+ 0.64 8.07 5.82E-15 Box Plot
THCA rs6010472 chr22:49157038 A/T NDUFA6 chr22:42481529-42486959:- 0.62 8.4 5.14E-16 Box Plot
THCA rs6010472 chr22:49157038 A/T NF2 chr22:29999545-30094587:+ 0.56 6.4 3.71E-10 Box Plot
THCA rs6010472 chr22:49157038 A/T NHP2L1 chr22:42069934-42086508:- 0.66 8.13 3.66E-15 Box Plot
THCA rs6010472 chr22:49157038 A/T NIPSNAP1 chr22:29950797-29977326:- 0.74 7.24 1.85E-12 Box Plot
THCA rs6010472 chr22:49157038 A/T NOL12 chr22:38077680-38089485:+ 0.59 9.46 1.43E-19 Box Plot
THCA rs6010472 chr22:49157038 A/T NUP50 chr22:45559722-45583896:+ 0.53 6.57 1.29E-10 Box Plot
THCA rs6010472 chr22:49157038 A/T PATZ1 chr22:31721790-31742218:- 0.5 6.7 5.7E-11 Box Plot
THCA rs6010472 chr22:49157038 A/T PES1 chr22:30972612-31003070:- 0.57 7.5 3.07E-13 Box Plot
THCA rs6010472 chr22:49157038 A/T PHF5A chr22:41855721-41864729:- 0.63 7.85 2.83E-14 Box Plot
THCA rs6010472 chr22:49157038 A/T PI4KA chr22:21061979-21213705:- 0.58 9.21 1.06E-18 Box Plot
THCA rs6010472 chr22:49157038 A/T PICK1 chr22:38452318-38471708:+ 0.73 9.22 9.26E-19 Box Plot
THCA rs6010472 chr22:49157038 A/T PITPNB chr22:28247657-28316122:- 0.72 6.81 3.01E-11 Box Plot
THCA rs6010472 chr22:49157038 A/T PLA2G6 chr22:38507502-38601697:- 0.32 6.03 3.33E-9 Box Plot